Fare Guide

Estimated lowest fares found within 7 days

Cheapest Airline Spirit Airlines

The cheapest airline(s) flying from New York City to San Juan is Spirit Airlines.

  • Spirit Airlines Spirit Airlines
  • Frontier Airlines Frontier Airlines
  • JetBlue Airways JetBlue Airways
  • Delta Air Lines Delta Air Lines
  • United Airlines United Airlines
  • American Airlines American Airlines
  • Avianca Avianca
Cheapest Month May

Travel Period: April 2024 - March 2025

The cheapest month(s) to fly from New York City to San Juan is May.

  • Apr 2024
  • May 2024
  • Jun 2024
  • Jul 2024
  • Aug 2024
  • Sep 2024
  • Oct 2024
  • Nov 2024
  • Dec 2024
  • Jan 2025
  • Feb 2025
  • Mar 2025
Cheapest Day of the Week Saturday

The cheapest day(s) of the week to fly from New York City to San Juan is Saturday.

  • Sun Sunday
  • Mon Monday
  • Tue Tuesday
  • Wed Wednesday
  • Thu Thursday
  • Fri Friday
  • Sat Saturday
Cheapest Time 12pm

The cheapest time of the day to fly from New York City to San Juan is in the morning.

Early Morning 12:01am - 06:00am
Morning 6:01am - 12:00pm
Afternoon 12:01pm - 6:00pm
Evening 6:01pm to 12:00am
12am
6am
12pm
6pm

Flight Schedules

Last Updated: Sat, 2 Mar, 2024

  • Depart Earliest
    • Earliest
    • Latest
  • Arrive
    • Earliest
    • Latest
  • Airline Filter by Airline
    All
  • Total Duration
    • Shortest
    • Longest
  • Stopover
    All
  • Availability
    • M
    • T
    • W
    • T
    • F
    • S
    • S
  • 21:59 - 01:45+ 1
    JFK - SJU
  • 21:59 (JFK)New York John F. Kennedy International Airport
  • 01:45 (SJU)San Juan Luis Munoz Marin Intl Airport + 1
  • JetBlue Airways (B6 1903)Airbus A220 300
  • 3h 46m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Airbus A220 300
  • 21:59 - 01:50+ 1
    JFK - SJU
  • 21:59 (JFK)New York John F. Kennedy International Airport
  • 01:50 (SJU)San Juan Luis Munoz Marin Intl Airport + 1
  • JetBlue Airways (B6 1903)Airbus A220 300
  • 3h 51m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus A220 300
  • 22:59 - 02:50+ 1
    JFK - SJU
  • 22:59 (JFK)New York John F. Kennedy International Airport
  • 02:50 (SJU)San Juan Luis Munoz Marin Intl Airport + 1
  • JetBlue Airways (B6 403)Airbus
  • 3h 51m
  • Direct
    • M
    • -
    • W
    • T
    • F
    • S
    • -
  • Airbus
  • 22:59 - 02:47+ 1
    JFK - SJU
  • 22:59 (JFK)New York John F. Kennedy International Airport
  • 02:47 (SJU)San Juan Luis Munoz Marin Intl Airport + 1
  • JetBlue Airways (B6 403)Airbus
  • 3h 48m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 06:49 - 10:33
    JFK - SJU
  • 06:49 (JFK)New York John F. Kennedy International Airport
  • 10:33 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1603)Airbus
  • 3h 44m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • -
    • S
  • Airbus
  • 07:00 - 10:45
    JFK - SJU
  • 07:00 (JFK)New York John F. Kennedy International Airport
  • 10:45 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1603)Airbus
  • 3h 45m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • Airbus
  • 07:15 - 11:02
    EWR - SJU
  • 07:15 (EWR)Newark Liberty International Airport
  • 11:02 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1289)Airbus
  • 3h 47m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • -
    • -
  • Airbus
  • 07:15 - 11:13
    EWR - SJU
  • 07:15 (EWR)Newark Liberty International Airport
  • 11:13 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1289)Airbus
  • 3h 58m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 07:37 - 11:23
    EWR - SJU
  • 07:37 (EWR)Newark Liberty International Airport
  • 11:23 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1289)Airbus
  • 3h 46m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • Airbus
  • 07:55 - 11:56
    EWR - SJU
  • 07:55 (EWR)Newark Liberty International Airport
  • 11:56 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 2143)Boeing 767 400
  • 4h 01m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Boeing 767 400
  • 07:55 - 11:47
    EWR - SJU
  • 07:55 (EWR)Newark Liberty International Airport
  • 11:47 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 2143)Boeing 767 400
  • 3h 52m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • -
    • -
  • Boeing 767 400
  • 08:10 - 12:11
    EWR - SJU
  • 08:10 (EWR)Newark Liberty International Airport
  • 12:11 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 2143)Boeing 767 400
  • 4h 01m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • Boeing 767 400
  • 08:10 - 12:16
    JFK - SJU
  • 08:10 (JFK)New York John F. Kennedy International Airport
  • 12:16 (SJU)San Juan Luis Munoz Marin Intl Airport
  • Delta Air Lines (DL 1877)Airbus A321 Neo
  • 4h 06m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • S
  • Airbus A321 Neo
  • 08:59 - 13:00
    JFK - SJU
  • 08:59 (JFK)New York John F. Kennedy International Airport
  • 13:00 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 503)Airbus
  • 4h 01m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 09:30 - 13:29
    JFK - SJU
  • 09:30 (JFK)New York John F. Kennedy International Airport
  • 13:29 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 503)Airbus
  • 3h 59m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Airbus
  • 09:40 - 13:44
    EWR - SJU
  • 09:40 (EWR)Newark Liberty International Airport
  • 13:44 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 1556)Boeing 737 900
  • 4h 04m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Boeing 737 900
  • 09:46 - 13:41
    EWR - SJU
  • 09:46 (EWR)Newark Liberty International Airport
  • 13:41 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 1556)Boeing 737 800
  • 3h 55m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Boeing 737 800
  • 10:30 - 14:15
    JFK - SJU
  • 10:30 (JFK)New York John F. Kennedy International Airport
  • 14:15 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 903)Airbus
  • 3h 45m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • Airbus
  • 11:00 - 14:45
    JFK - SJU
  • 11:00 (JFK)New York John F. Kennedy International Airport
  • 14:45 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 903)Airbus
  • 3h 45m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • -
    • -
  • Airbus
  • 11:00 - 14:55
    JFK - SJU
  • 11:00 (JFK)New York John F. Kennedy International Airport
  • 14:55 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 903)Airbus
  • 3h 55m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 13:00 - 16:54
    JFK - SJU
  • 13:00 (JFK)New York John F. Kennedy International Airport
  • 16:54 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 2703)Airbus
  • 3h 54m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 13:00 - 16:45
    JFK - SJU
  • 13:00 (JFK)New York John F. Kennedy International Airport
  • 16:45 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 2703)Airbus
  • 3h 45m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Airbus
  • 13:05 - 17:02
    JFK - SJU
  • 13:05 (JFK)New York John F. Kennedy International Airport
  • 17:02 (SJU)San Juan Luis Munoz Marin Intl Airport
  • Delta Air Lines (DL 1961)Boeing 737 900
  • 3h 57m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • S
  • Boeing 737 900
  • 15:18 - 19:14
    JFK - SJU
  • 15:18 (JFK)New York John F. Kennedy International Airport
  • 19:14 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 2903)Airbus
  • 3h 56m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 15:18 - 19:08
    JFK - SJU
  • 15:18 (JFK)New York John F. Kennedy International Airport
  • 19:08 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 2903)Airbus
  • 3h 50m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Airbus
  • 19:05 - 23:11
    JFK - SJU
  • 19:05 (JFK)New York John F. Kennedy International Airport
  • 23:11 (SJU)San Juan Luis Munoz Marin Intl Airport
  • Delta Air Lines (DL 1859)Boeing 737 900
  • 4h 06m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • S
  • Boeing 737 900
  • 19:19 - 23:17
    EWR - SJU
  • 19:19 (EWR)Newark Liberty International Airport
  • 23:17 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 389)Airbus
  • 3h 58m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus
  • 19:19 - 23:15
    EWR - SJU
  • 19:19 (EWR)Newark Liberty International Airport
  • 23:15 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 389)Airbus
  • 3h 56m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Airbus
  • 19:40 - 23:36
    EWR - SJU
  • 19:40 (EWR)Newark Liberty International Airport
  • 23:36 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 1543)Boeing 737 900
  • 3h 56m
  • Direct
    • M
    • T
    • W
    • T
    • F
    • S
    • -
  • Boeing 737 900
  • 19:59 - 23:57
    EWR - SJU
  • 19:59 (EWR)Newark Liberty International Airport
  • 23:57 (SJU)San Juan Luis Munoz Marin Intl Airport
  • United Airlines (UA 1543)Boeing 737 800
  • 3h 58m
  • Direct
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Boeing 737 800

Connecting Flights

  • 06:00 - 07:32
    LGA - YUL
    09:00 - 13:30
    YUL - SJU
  • 06:00 (LGA)New York La Guardia Airport
    09:00 (YUL)Montreal Pierre Elliott Trudeau Int Airport
  • 07:32 (YUL)Montreal Pierre Elliott Trudeau Int Airport
    13:30 (SJU)San Juan Luis Munoz Marin Intl Airport
  • Air Canada (AC 8631)Embraer Emb 175
    Air Canada (AC 1728)Airbus
  • 7h 30m (1h 28m)
  • YUL Montréal 1h 28m
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • 10:25 - 13:25
    LGA - TPA
    14:30 - 17:20
    TPA - SJU
  • 10:25 (LGA)New York La Guardia Airport
    14:30 (TPA)Tampa International Airport
  • 13:25 (TPA)Tampa International Airport
    17:20 (SJU)San Juan Luis Munoz Marin Intl Airport
  • (WN 1070)Boeing 737 800
    (WN 970)Boeing 737 800
  • 6h 55m (1h 05m)
  • TPA 1h 05m
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • 16:15 - 17:34+ 1
    LGA - BOS
    20:30 - 00:23+ 1
    BOS - SJU
  • 16:15 (LGA)New York La Guardia Airport
    20:30 (BOS)Boston Logan International Airport
  • 17:34 (BOS)Boston Logan International Airport + 1
    00:23 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1032)Embraer Emb E90
    JetBlue Airways (B6 561)Airbus
  • 8h 08m (2h 56m)
  • BOS Boston 2h 56m
    • M
    • T
    • W
    • T
    • F
    • -
    • -
  • 17:15 - 18:42+ 1
    LGA - BOS
    20:30 - 00:23+ 1
    BOS - SJU
  • 17:15 (LGA)New York La Guardia Airport
    20:30 (BOS)Boston Logan International Airport
  • 18:42 (BOS)Boston Logan International Airport + 1
    00:23 (SJU)San Juan Luis Munoz Marin Intl Airport
  • JetBlue Airways (B6 1132)Embraer Emb E90
    JetBlue Airways (B6 561)Airbus
  • 7h 08m (1h 48m)
  • BOS Boston 1h 48m
    • M
    • T
    • W
    • T
    • F
    • -
    • -
No Schedules Sorry, there are no schedules matching your filters. Try removing one. reset
What’s the fastest flight time from New York City to San Juan?

The fastest flight time for direct flights from New York City to San Juan is 3 hours 44 minutes. Check latest flight schedules & prices on Wego.

What’s the most popular airline flying from New York City to San Juan?

The most popular airline flying from New York City to San Juan is Delta Air Lines. Find the latest flight deals on Wego.

How far is San Juan from New York City?

The flight distance between New York City and San Juan is 2586km. Check all available flights on Wego.

When is the earliest and latest flight of the day?

The earliest flight of the day departs at 06:00. The last flight of the day departs at 21:59. See the full list of flight times on Wego.

How many airlines offer direct flights from New York City to San Juan?

There are 3 airlines that offer direct flights from New York City to San Juan. Find out the list of airlines on Wego.